Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000002682SMYLE_N domain-containing protein. (1123 aa)    
Predicted Functional Partners:
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
    
 
 0.877
LOC113030206
Malate synthase-like.
   
 
 0.863
ENSACLP00000002675
Uncharacterized protein.
 
      0.848
ENSACLP00000016798
Pericentrin.
   
 0.829
AKAP9
A-kinase anchoring protein 9.
   
 0.829
ENSACLP00000015298
NBR1 autophagy cargo receptor b.
    
 0.747
LOC113028111
NBR1 autophagy cargo receptor a.
    
 0.747
ENSACLP00000009777
WDFY family member 4.
    
  0.694
ENSACLP00000010328
Uncharacterized protein.
    
  0.694
nme9
NME/NM23 family member 8; Belongs to the NDK family.
   
 
 0.634
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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