STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000002696PWWP domain-containing protein. (110 aa)    
Predicted Functional Partners:
ENSACLP00000002677
LEDGF domain-containing protein.
 
      0.880
cdk12
Cyclin-dependent kinase 12.
    
 
 0.666
cdk13
Cyclin-dependent kinase 13.
    
 
 0.666
ccnq
Cyclin Q; Belongs to the cyclin family.
   
 
 0.533
ccnt2
Cyclin T2; Belongs to the cyclin family.
   
 
 0.533
LOC113013617
Cyclin T1; Belongs to the cyclin family.
   
 
 0.533
ccnk
Cyclin K; Belongs to the cyclin family.
   
 
 0.533
ENSACLP00000040608
Cyclin N-terminal domain-containing protein.
   
 
 0.533
ENSACLP00000017667
Amine oxidase.
    
   0.461
ENSACLP00000017740
Amine oxidase.
    
   0.461
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.