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Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000002698Integrin beta; Belongs to the integrin beta chain family. (809 aa)    
Predicted Functional Partners:
itga8
Integrin, alpha 8; Belongs to the integrin alpha chain family.
   
 0.947
itgav
Integrin, alpha V; Belongs to the integrin alpha chain family.
   
 0.946
LOC113012814
Integrin, alpha 5 (fibronectin receptor, alpha polypeptide); Belongs to the integrin alpha chain family.
   
 0.935
LOC113022983
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
   
 0.935
itga10
Integrin, alpha 10; Belongs to the integrin alpha chain family.
   
 0.908
LOC113031147
Vitronectin b.
    
 0.896
LOC113036098
Vitronectin a.
    
 0.896
ENSACLP00000024804
Fermitin family member 3b.
   
 0.890
ENSACLP00000027966
Talin 2b.
   
 0.884
LOC113025234
Parvin, alpha a.
   
 0.878
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.