Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000002722Family with sequence similarity 32 member A. (114 aa)    
Predicted Functional Partners:
ENSACLP00000010721
SLU7 homolog, splicing factor.
   
 0.998
ENSACLP00000037635
CWC22 spliceosome associated protein homolog.
    
  0.998
ENSACLP00000004689
Cactin.
    
 0.996
ENSACLP00000002234
NFKB activating protein.
    
 0.995
sde2
SDE2 telomere maintenance homolog (S. pombe).
    
 0.995
syf2
SYF2 pre-mRNA-splicing factor.
   
 0.995
cdc40
Cell division cycle 40 homolog (S. cerevisiae).
    
 0.992
ppil1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
  0.990
ppwd1
Peptidylprolyl isomerase domain and WD repeat containing 1.
   
  0.989
c12h9orf78
Zgc:103692.
   
  0.984
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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