Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000002725Titin-cap (telethonin). (203 aa)    
Predicted Functional Partners:
myoz1
Uncharacterized protein.
   
 
 0.910
LOC113031756
Uncharacterized protein.
     
  0.872
csrp3
Cysteine and glycine-rich protein 3 (cardiac LIM protein).
   
 
 0.809
ENSACLP00000029266
Nebulin.
   
 
 0.756
ENSACLP00000038177
Myosin binding protein C, cardiac.
    
 0.706
myot
Myotilin.
   
  
 0.701
LOC113018648
Myozenin 2a.
   
 
 0.687
LOC113024245
Myozenin 2b.
   
 
 0.687
ENSACLP00000029373
Uncharacterized protein.
   
 
 0.667
LOC113034175
Myosin, light chain 2b, regulatory, cardiac, slow.
   
 
 0.664
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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