Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC113011298Zgc:85843. (421 aa)    
Predicted Functional Partners:
ENSACLP00000009497
Matrix-remodelling associated 8a.
      
 0.664
tspan33
Tetraspanin.
      
 0.655
LOC113008879
Patatin-like phospholipase domain containing 3.
      
 0.584
tmem182
Transmembrane protein 182a.
      
 0.565
LOC113016681
Transmembrane protein 182b.
      
 0.565
TIMM22
Translocase of inner mitochondrial membrane 22.
      
 0.518
grasp
GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein.
      
 0.468
acsbg2
Acyl-CoA synthetase bubblegum family member 2.
      
 0.461
acsbg1
Acyl-CoA synthetase bubblegum family member 1.
      
 0.461
LOC113034409
AMP-binding domain-containing protein.
      
 0.461
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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