STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113020910Transportin 2 (importin 3, karyopherin beta 2b). (889 aa)    
Predicted Functional Partners:
ENSACLP00000029182
Importin 4.
   
 0.986
ipo5
Karyopherin (importin) beta 3.
   
 0.983
kpnb1
Karyopherin (importin) beta 1.
   
 0.968
ENSACLP00000029283
Importin 9.
   
 0.966
ipo8
Importin 8.
   
 0.960
tnpo3
Transportin 3.
   
 0.948
ENSACLP00000038789
Importin N-terminal domain-containing protein.
   
 0.948
ipo7
Importin 7.
   
 0.948
ENSACLP00000022118
Importin 11.
   
 
 0.923
ENSACLP00000016856
Importin 13.
   
 
 0.911
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.