STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113007136Uncharacterized protein. (1769 aa)    
Predicted Functional Partners:
ENSACLP00000012866
Uncharacterized protein.
     
 0.982
ENSACLP00000012873
SH3 domain-containing protein.
     
 0.982
ENSACLP00000014175
Intersectin 2b.
     
 0.982
mttp
Microsomal triglyceride transfer protein.
   
 0.878
sorl1
Sortilin-related receptor, L(DLR class) A repeats containing.
    
 0.859
ENSACLP00000034959
Uncharacterized protein.
    
 0.859
LOC113014972
Apolipoprotein A-IV a.
   
 0.814
LOC113032020
Uncharacterized protein.
   
 0.814
LOC113032148
Uncharacterized protein.
   
 0.814
ENSACLP00000016344
Uncharacterized protein.
   
 0.740
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.