Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cfap45Cilia and flagella associated protein 45. (530 aa)    
Predicted Functional Partners:
cfap52
Cilia and flagella associated protein 52.
   
 
 0.932
ENSACLP00000008758
Cilia and flagella associated protein 126.
   
 
 0.927
efhc1
EF-hand domain (C-terminal) containing 1.
  
 
 0.925
ENSACLP00000003705
Uncharacterized protein.
   
 
 0.905
drc7
Uncharacterized protein.
   
 
 0.903
cfap20
Cilia and flagella associated protein 20.
    
 
 0.893
ENSACLP00000035059
Radial spoke head 3.
   
 
 0.887
tekt2
Tektin 2 (testicular).
   
 
 0.870
drc3
Dynein regulatory complex subunit 3.
   
 
 0.855
efhc2
EF-hand domain (C-terminal) containing 2.
   
 
 0.854
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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