Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113010447Uncharacterized protein. (1296 aa)    
Predicted Functional Partners:
ENSACLP00000004661
Brevican.
   
 0.851
LOC113015316
Uncharacterized protein.
   
 0.851
LOC113008807
Protein tyrosine phosphatase receptor type Z1b.
   
 
 0.821
LOC113026289
Protein tyrosine phosphatase receptor type Z1a.
   
 
 0.821
LOC113030681
LRRNT domain-containing protein.
   
 
 0.768
omg
Oligodendrocyte myelin glycoprotein b.
   
 
 0.768
tnn
Tenascin N.
    
 0.647
LOC113022754
Tankyrase_bdg_C domain-containing protein.
    
  0.646
cntn2
Contactin 2.
   
 0.633
CHST15
Carbohydrate sulfotransferase 15.
    
  0.614
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.