Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC113009221MyoD family inhibitor domain containing. (278 aa)    
Predicted Functional Partners:
frmd4b
FERM domain containing 4Ba.
    
 
 0.735
ENSACLP00000033251
2-epi-5-epi-valiolone synthase.
      
 0.729
frmd4a
FERM domain containing 4A.
    
 
 0.681
bdh2
3-hydroxybutyrate dehydrogenase, type 2.
      
 0.650
spry1
Sprouty homolog 1, antagonist of FGF signaling (Drosophila).
  
 
   0.626
ENSACLP00000039212
DTW domain containing 2.
      
 0.623
ENSACLP00000033692
Forkhead box P1b.
      
 0.566
zfyve26
Zinc finger, FYVE domain containing 26.
    
   0.543
mitf
Melanocyte inducing transcription factor a.
      
 0.501
nudcd1
NudC domain containing 1.
      
 0.449
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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