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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000002778Insulin-like growth factor 2 receptor. (2403 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
   
 0.988
ENSACLP00000002940
DnaJ (Hsp40) homolog, subfamily C, member 6.
   
 0.986
igf2
Insulin-like growth factor 2b.
    
 
 0.963
LOC113024008
Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.
    
 
 0.926
gga3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3b.
    
 
 0.926
m6pr
Mannose-6-phosphate receptor (cation dependent).
     
 0.925
LOC113024512
Uncharacterized protein.
    
 
 0.897
LOC113023714
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
    
 
 0.897
LOC113021179
Uncharacterized protein.
    
 
 0.897
snx6
Sorting nexin; Involved in several stages of intracellular trafficking.
     
 0.801
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.