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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113008514ANK_REP_REGION domain-containing protein. (642 aa)    
Predicted Functional Partners:
gad2
Glutamate decarboxylase 2.
  
 
 0.882
gad1
Glutamate decarboxylase 1a.
  
 
 0.882
ENSACLP00000007650
Uncharacterized protein.
  
 
 0.880
LOC113010476
Glutamate decarboxylase 1b.
  
 
 0.873
LOC113010975
Glutamine synthetase.
    
 0.872
LOC113016678
Glutamine synthetase.
    
 0.872
LOC113026010
Glutamine synthetase.
    
 0.872
sgpl1
Sphingosine-1-phosphate lyase 1.
  
 
 0.871
LOC113028243
Glutamate dehydrogenase 1b; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.870
glud1
Glutamate dehydrogenase 1a; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.870
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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