STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
diaph2Diaphanous-related formin 2. (1145 aa)    
Predicted Functional Partners:
LOC113022989
Cell division cycle 42.
   
 0.951
ENSACLP00000012848
Uncharacterized protein.
   
 0.928
LOC113013171
Uncharacterized protein.
   
 0.913
LOC113022007
Ras homolog family member Cb.
   
 0.913
LOC113017775
Profilin; Belongs to the profilin family.
    
 0.908
LOC113010667
Profilin; Belongs to the profilin family.
    
 0.895
pfn2
Profilin; Belongs to the profilin family.
    
 0.895
DIAPH1
Diaphanous related formin 1.
  
  
 
0.849
LOC113012818
Uncharacterized protein.
   
 0.845
LOC113012962
Uncharacterized protein.
   
 0.845
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.