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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113030261T cell lymphoma invasion and metastasis 1a. (1674 aa)    
Predicted Functional Partners:
LOC113022989
Cell division cycle 42.
    
 0.894
LOC113011389
Par-3 family cell polarity regulator alpha, b.
    
 0.883
PARD3
Par-3 family cell polarity regulator.
    
 0.883
mras
Muscle RAS oncogene homolog.
    
 0.857
LOC113033441
Uncharacterized protein.
     
 0.826
LOC113033004
Rho related BTB domain containing 4.
    
 0.787
LOC113023559
SH3 and PX domains 2Aa.
    
 0.723
ncf4
Neutrophil cytosolic factor 4.
    
 0.723
sh3pxd2b
SH3 and PX domains 2B.
    
 0.723
SH3PXD2A
SH3 and PX domains 2A.
    
 0.723
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.