STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000002816Uncharacterized protein. (262 aa)    
Predicted Functional Partners:
tnnc1
Troponin C type 1b (slow).
   
 0.987
ENSACLP00000011933
Troponin I type 1a (skeletal, slow).
  
 0.970
ENSACLP00000034147
Troponin I type 1b (skeletal, slow).
  
 0.970
LOC113032670
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.945
ENSACLP00000012012
Troponin T type 2a (cardiac).
  
  
 
0.929
ENSACLP00000034083
Troponin T type 2b (cardiac).
  
  
 
0.928
LOC113025100
Troponin I type 2a (skeletal, fast), tandem duplicate 1.
  
 0.927
ENSACLP00000013800
Uncharacterized protein.
  
 0.927
LOC113025104
Uncharacterized protein.
  
 0.923
ENSACLP00000003528
Troponin I4b, tandem duplicate 2.
  
 0.923
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.