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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000002850Uncharacterized protein. (112 aa)    
Predicted Functional Partners:
cbfb
Core-binding factor subunit beta.
    
 0.660
nfatc2
Nuclear factor of activated T cells 2a.
    
 0.632
LOC113015873
Runt-related transcription factor.
    
 0.605
runx3
Runt-related transcription factor.
    
 0.605
runx2
Runt-related transcription factor.
    
 0.605
LOC113035412
Runt domain-containing protein.
    
 0.605
ENSACLP00000037567
PR domain containing 14.
    
 0.544
rorb
RAR-related orphan receptor B.
    
 0.538
ENSACLP00000007236
Uncharacterized protein.
    
 0.535
rora
RAR-related orphan receptor A, paralog a.
    
 0.535
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.