STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113031953Complement 4B (Chido blood group). (1688 aa)    
Predicted Functional Partners:
ENSACLP00000037520
Uncharacterized protein.
   
 0.888
cfp
Uncharacterized protein.
   
 0.873
cfi
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.862
LOC113022067
Uncharacterized protein.
   
 0.849
ENSACLP00000037494
Sushi domain-containing protein.
    
 0.801
ENSACLP00000035912
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.791
ENSACLP00000035927
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.791
LOC113036443
Peptidase S1 domain-containing protein.
   
 0.779
ENSACLP00000035958
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.777
LOC113035827
Si:ch1073-280e3.1; Belongs to the peptidase S1 family.
   
 0.771
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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