STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113007677Signal transducer and activator of transcription. (765 aa)    
Predicted Functional Partners:
jak1
Tyrosine-protein kinase.
    
 0.903
tyk2
Tyrosine-protein kinase.
    
 0.903
LOC113033249
Tyrosine-protein kinase.
    
 0.903
LOC113025906
Tyrosine-protein kinase.
    
 0.903
LOC113006843
Tyrosine-protein kinase.
    
 0.903
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.892
tbk1
TANK-binding kinase 1.
    
 0.887
irf9
Interferon regulatory factor 9.
    
 0.884
stat1
Signal transducer and activator of transcription.
     
  0.872
LOC113022559
Signal transducer and activator of transcription.
     
  0.872
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.