Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113030467Neurotrimin. (356 aa)    
Predicted Functional Partners:
iglon5
IgLON family member 5.
    
 
 0.660
SLITRK1
SLIT and NTRK like family member 1.
   
 0.567
RELN
Reelin.
      
 0.497
fgfr3
Fibroblast growth factor receptor.
    
 0.458
ENSACLP00000023118
Fibroblast growth factor receptor 4; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.458
LOC113033119
Fibroblast growth factor receptor.
    
 0.458
ENSACLP00000029128
Uncharacterized protein.
    
 0.458
fgfr2
Fibroblast growth factor receptor.
    
 0.458
LOC113013517
Erb-b2 receptor tyrosine kinase 3b.
    
  0.435
ENSACLP00000014200
Receptor protein-tyrosine kinase.
    
  0.435
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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