STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113035402Cyclin B2; Belongs to the cyclin family. (386 aa)    
Predicted Functional Partners:
ENSACLP00000035671
Cell division cycle 20 homolog.
   
 0.990
ENSACLP00000038411
Cell division cycle 20 homolog.
   
 0.990
cdc27
Cell division cycle 27.
   
 0.978
ENSACLP00000006245
Protein kinase domain-containing protein.
   
 0.977
ENSACLP00000007272
Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.
   
 0.977
LOC113009944
Fizzy/cell division cycle 20 related 1b.
   
 0.977
anapc10
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
   
 0.976
FZR1
Fizzy/cell division cycle 20 related 1a.
   
 0.974
LOC113016698
WD_REPEATS_REGION domain-containing protein.
   
 0.974
anapc4
Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.
    
 0.973
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.