STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NELL1Neural EGFL like 1. (836 aa)    
Predicted Functional Partners:
ENSACLP00000003461
Roundabout, axon guidance receptor, homolog 3 (Drosophila).
    
 0.948
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.648
ENSACLP00000017664
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.648
ENSACLP00000022686
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
 0.648
NCSTN
Nicastrin.
    
 0.622
LOC113022754
Tankyrase_bdg_C domain-containing protein.
   
  0.612
LOC113012058
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 0.610
LOC113023515
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 0.610
LOC113036502
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.603
ripk4
Receptor-interacting serine-threonine kinase 4.
   
  0.591
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (38%) [HD]