Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
wdr75WD repeat domain 75. (837 aa)    
Predicted Functional Partners:
ENSACLP00000014943
UTP15 small subunit processome component.
   
 0.999
utp4
UTP4 small subunit processome component.
   
 0.999
wdr43
WD repeat domain 43.
   
 0.999
wdr36
WD repeat domain 36.
   
 0.998
utp6
UTP6 small subunit processome component.
   
 0.997
LOC113016769
PWP2 small subunit processome component.
   
 0.997
utp3
UTP3 small subunit processome component.
   
 0.997
ENSACLP00000036883
NOP58 ribonucleoprotein homolog (yeast).
   
 0.997
bms1
BMS1 ribosome biogenesis factor.
   
 0.996
nol6
Nucleolar protein 6.
   
 0.996
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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