STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000002984DDE_3 domain-containing protein. (338 aa)    
Predicted Functional Partners:
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.683
rbbp5
Retinoblastoma binding protein 5.
    
 0.682
CDYL2
Chromodomain Y like 2.
    
 0.682
cdyl
Chromodomain protein, Y-like.
    
 0.682
eed
Embryonic ectoderm development.
    
 0.631
dot1l
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
    
 0.619
ENSACLP00000026627
M-phase phosphoprotein 8.
    
 0.591
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.588
ripk4
Receptor-interacting serine-threonine kinase 4.
    
  0.583
prdm4
PR domain containing 4.
   
  0.579
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.