Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSACLP00000002998Si:ch1073-396h14.1. (412 aa)    
Predicted Functional Partners:
LOC113031642
Tumor necrosis factor b (TNF superfamily, member 2).
    
 0.928
ENSACLP00000038959
C-mer proto-oncogene tyrosine kinase a.
    
 0.888
LOC113034822
Heparin-binding EGF-like growth factor a.
    
 0.886
AXL
AXL receptor tyrosine kinase.
    
 0.883
adam10
Uncharacterized protein.
     
 0.876
RHBDF2
Rhomboid 5 homolog 2.
    
 0.876
ENSACLP00000011062
Rhomboid 5 homolog 1a (Drosophila).
    
 0.876
LOC113026622
ADAM metallopeptidase domain 10b.
     
 0.876
LOC113028622
Rhomboid 5 homolog 1b (Drosophila).
    
 0.876
adam17
ADAM metallopeptidase domain 17b.
     
  0.872
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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