Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003008Arf-GAP domain-containing protein. (500 aa)    
Predicted Functional Partners:
arfgap1
ADP-ribosylation factor GTPase activating protein 1.
    
 0.930
arfgap2
ADP-ribosylation factor GTPase activating protein 2.
    
 0.788
arfgap3
ADP-ribosylation factor GTPase activating protein 3.
    
 0.788
AGAP2
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2.
     
 0.781
agap1
ArfGAP with GTPase domain, ankyrin repeat and PH domain 1.
     
 0.781
LOC113013301
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2.
     
 0.781
LOC113010699
ArfGAP with GTPase domain, ankyrin repeat and PH domain 3.
     
 0.781
ENSACLP00000022676
Uncharacterized protein.
    
 0.780
ENSACLP00000022875
ArfGAP with SH3 domain, ankyrin repeat and PH domain 3.
    
 0.780
sh3yl1
SH3 and SYLF domain containing 1.
    
 
 0.777
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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