Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113017706Ig-like domain-containing protein. (280 aa)    
Predicted Functional Partners:
ENSACLP00000024801
Ig-like domain-containing protein.
  
0.950
LOC113009905
Ig-like domain-containing protein.
  
 
0.900
cd74
CD74 molecule, major histocompatibility complex, class II invariant chain a.
   
 0.890
ENSACLP00000037142
Uncharacterized protein.
   
 0.834
ENSACLP00000002967
Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.811
ENSACLP00000000320
Uncharacterized protein.
    
  0.793
ENSACLP00000009395
Ig-like domain-containing protein.
     
  0.782
cd247
Uncharacterized protein.
   
 
 0.778
ENSACLP00000005413
Ig-like domain-containing protein.
  
 
 
0.751
LOC113017412
Ig-like domain-containing protein.
  
 
 
0.748
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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