STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003027Complement 4B (Chido blood group). (1657 aa)    
Predicted Functional Partners:
ENSACLP00000037520
Uncharacterized protein.
   
 0.964
cfi
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.943
cfp
Uncharacterized protein.
   
 0.935
LOC113035827
Si:ch1073-280e3.1; Belongs to the peptidase S1 family.
   
 0.875
LOC113030597
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.875
LOC113022203
C1q domain-containing protein.
   
 0.868
ENSACLP00000011000
Uncharacterized protein.
   
 0.853
LOC113022067
Uncharacterized protein.
    
 0.826
ENSACLP00000037494
Sushi domain-containing protein.
   
 0.805
c9
Complement component 9.
   
 0.782
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.