ENSACLP00000003035 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSACLP00000003035

Uncharacterized protein. (442 aa)

Predicted Functional Partners:

ENSACLP00000003079

0.955

ENSACLP00000016352

0.955

itga1

0.836

ENSACLP00000013746

0.836

itga10

0.836

itgb5

0.834

itgb1

0.830

LOC113010138

0.828

itga8

0.827

ENSACLP00000031964

0.826

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000003035	ENSACLP00000003079	ENSACLP00000003035	ENSACLP00000003079	Uncharacterized protein.	Uncharacterized protein.	0.955
ENSACLP00000003035	ENSACLP00000013746	ENSACLP00000003035	ENSACLP00000013746	Uncharacterized protein.	Integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2; Belongs to the integrin alpha chain family.	0.836
ENSACLP00000003035	ENSACLP00000016352	ENSACLP00000003035	ENSACLP00000016352	Uncharacterized protein.	Uncharacterized protein.	0.955
ENSACLP00000003035	ENSACLP00000031964	ENSACLP00000003035	ENSACLP00000031964	Uncharacterized protein.	Integrin beta; Belongs to the integrin beta chain family.	0.826
ENSACLP00000003035	LOC113010138	ENSACLP00000003035	ENSACLP00000002949	Uncharacterized protein.	Integrin beta; Belongs to the integrin beta chain family.	0.828
ENSACLP00000003035	itga1	ENSACLP00000003035	ENSACLP00000002491	Uncharacterized protein.	Integrin, alpha 1; Belongs to the integrin alpha chain family.	0.836
ENSACLP00000003035	itga10	ENSACLP00000003035	ENSACLP00000029525	Uncharacterized protein.	Integrin, alpha 10; Belongs to the integrin alpha chain family.	0.836
ENSACLP00000003035	itga8	ENSACLP00000003035	ENSACLP00000008400	Uncharacterized protein.	Integrin, alpha 8; Belongs to the integrin alpha chain family.	0.827
ENSACLP00000003035	itgb1	ENSACLP00000003035	ENSACLP00000016891	Uncharacterized protein.	Integrin beta; Belongs to the integrin beta chain family.	0.830
ENSACLP00000003035	itgb5	ENSACLP00000003035	ENSACLP00000031931	Uncharacterized protein.	Integrin beta; Belongs to the integrin beta chain family.	0.834
ENSACLP00000003079	ENSACLP00000003035	ENSACLP00000003079	ENSACLP00000003035	Uncharacterized protein.	Uncharacterized protein.	0.955
ENSACLP00000003079	ENSACLP00000013746	ENSACLP00000003079	ENSACLP00000013746	Uncharacterized protein.	Integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2; Belongs to the integrin alpha chain family.	0.816
ENSACLP00000003079	ENSACLP00000016352	ENSACLP00000003079	ENSACLP00000016352	Uncharacterized protein.	Uncharacterized protein.	0.548
ENSACLP00000003079	ENSACLP00000031964	ENSACLP00000003079	ENSACLP00000031964	Uncharacterized protein.	Integrin beta; Belongs to the integrin beta chain family.	0.806
ENSACLP00000003079	LOC113010138	ENSACLP00000003079	ENSACLP00000002949	Uncharacterized protein.	Integrin beta; Belongs to the integrin beta chain family.	0.722
ENSACLP00000003079	itga1	ENSACLP00000003079	ENSACLP00000002491	Uncharacterized protein.	Integrin, alpha 1; Belongs to the integrin alpha chain family.	0.816
ENSACLP00000003079	itga10	ENSACLP00000003079	ENSACLP00000029525	Uncharacterized protein.	Integrin, alpha 10; Belongs to the integrin alpha chain family.	0.816
ENSACLP00000003079	itga8	ENSACLP00000003079	ENSACLP00000008400	Uncharacterized protein.	Integrin, alpha 8; Belongs to the integrin alpha chain family.	0.807
ENSACLP00000003079	itgb1	ENSACLP00000003079	ENSACLP00000016891	Uncharacterized protein.	Integrin beta; Belongs to the integrin beta chain family.	0.722
ENSACLP00000003079	itgb5	ENSACLP00000003079	ENSACLP00000031931	Uncharacterized protein.	Integrin beta; Belongs to the integrin beta chain family.	0.814