Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mipepMitochondrial intermediate peptidase. (700 aa)    
Predicted Functional Partners:
ENSACLP00000008539
Uncharacterized protein.
    
   0.874
RIMS2
Regulating synaptic membrane exocytosis 2.
    
   0.874
mgme1
Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance. Has preference for 5'-3' exonuclease activity. Necessary for maintenance of proper 7S DNA levels. Probably involved in mitochondrial DNA (mtDNA) repair. Belongs to the MGME1 family.
    
   0.870
WDR1
WD repeat domain 1.
    
   0.767
sdhaf4
Succinate dehydrogenase complex assembly factor 4.
    
 
 0.745
pitrm1
Pitrilysin metallopeptidase 1.
   
 
 0.735
hbs1l
HBS1-like translational GTPase.
      
 0.719
ENSACLP00000026032
Frataxin.
   
 
 0.703
GET1
Guided entry of tail-anchored proteins factor 1.
      
 0.702
dpp3
Dipeptidyl peptidase 3; Belongs to the peptidase M49 family.
   
  
 0.700
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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