Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ttc22Tetratricopeptide repeat domain 22. (572 aa)    
Predicted Functional Partners:
KRTCAP3
Keratinocyte associated protein 3.
      
 0.666
ENSACLP00000024949
Uncharacterized protein.
      
 0.665
FAM135B
Family with sequence similarity 135 member B.
      
 0.655
gask1a
Golgi associated kinase 1A.
      
 0.614
kiaa1958
Uncharacterized protein.
      
 0.614
ENSACLP00000026555
Uncharacterized protein.
      
 0.608
LOC113035844
tRNA-yW synthesizing protein 1 homolog (S. cerevisiae).
      
 0.527
ttc4
Tetratricopeptide repeat domain 4.
      
 0.517
ENSACLP00000029372
Coenzyme Q2 4-hydroxybenzoate polyprenyltransferase.
      
 0.502
tmem150c
Transmembrane protein 150C.
      
 0.502
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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