STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003051G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (309 aa)    
Predicted Functional Partners:
LOC113022754
Tankyrase_bdg_C domain-containing protein.
    
  0.604
ENSACLP00000018554
HAUS augmin-like complex, subunit 3.
    
 0.458
ENSACLP00000031169
Neurotensin.
    
  0.442
ENSACLP00000003169
HAUS augmin-like complex, subunit 1.
    
 0.439
LOC113024257
Prepronociceptin a.
    
  0.435
haus8
Uncharacterized protein.
    
  0.430
edn1
Endothelin 1.
    
  0.404
rbm42
RNA binding motif protein 42.
    
  0.404
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.