ENSACLP00000003058 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSACLP00000003058

Ig-like domain-containing protein. (134 aa)

Predicted Functional Partners:

PTK7

0.445

mre11

0.436

ENSACLP00000010675

0.424

ENSACLP00000010692

0.424

LOC113010188

0.424

hgfac

0.413

habp2

0.413

fbh1

0.405

cd79b

0.405

cd79a

0.404

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000003058	ENSACLP00000010675	ENSACLP00000003058	ENSACLP00000010675	Ig-like domain-containing protein.	Uncharacterized protein.	0.424
ENSACLP00000003058	ENSACLP00000010692	ENSACLP00000003058	ENSACLP00000010692	Ig-like domain-containing protein.	Uncharacterized protein.	0.424
ENSACLP00000003058	LOC113010188	ENSACLP00000003058	ENSACLP00000034665	Ig-like domain-containing protein.	Uncharacterized protein.	0.424
ENSACLP00000003058	PTK7	ENSACLP00000003058	ENSACLP00000033266	Ig-like domain-containing protein.	Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.445
ENSACLP00000003058	cd79a	ENSACLP00000003058	ENSACLP00000039417	Ig-like domain-containing protein.	CD79a molecule, immunoglobulin-associated alpha.	0.404
ENSACLP00000003058	cd79b	ENSACLP00000003058	ENSACLP00000038331	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.405
ENSACLP00000003058	fbh1	ENSACLP00000003058	ENSACLP00000006307	Ig-like domain-containing protein.	F-box DNA helicase 1.	0.405
ENSACLP00000003058	habp2	ENSACLP00000003058	ENSACLP00000032839	Ig-like domain-containing protein.	Uncharacterized protein.	0.413
ENSACLP00000003058	hgfac	ENSACLP00000003058	ENSACLP00000005830	Ig-like domain-containing protein.	HGF activator.	0.413
ENSACLP00000003058	mre11	ENSACLP00000003058	ENSACLP00000027130	Ig-like domain-containing protein.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.436
ENSACLP00000010675	ENSACLP00000003058	ENSACLP00000010675	ENSACLP00000003058	Uncharacterized protein.	Ig-like domain-containing protein.	0.424
ENSACLP00000010675	ENSACLP00000010692	ENSACLP00000010675	ENSACLP00000010692	Uncharacterized protein.	Uncharacterized protein.	0.503
ENSACLP00000010675	PTK7	ENSACLP00000010675	ENSACLP00000033266	Uncharacterized protein.	Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.659
ENSACLP00000010675	habp2	ENSACLP00000010675	ENSACLP00000032839	Uncharacterized protein.	Uncharacterized protein.	0.864
ENSACLP00000010675	hgfac	ENSACLP00000010675	ENSACLP00000005830	Uncharacterized protein.	HGF activator.	0.864
ENSACLP00000010692	ENSACLP00000003058	ENSACLP00000010692	ENSACLP00000003058	Uncharacterized protein.	Ig-like domain-containing protein.	0.424
ENSACLP00000010692	ENSACLP00000010675	ENSACLP00000010692	ENSACLP00000010675	Uncharacterized protein.	Uncharacterized protein.	0.503
ENSACLP00000010692	PTK7	ENSACLP00000010692	ENSACLP00000033266	Uncharacterized protein.	Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.659
ENSACLP00000010692	habp2	ENSACLP00000010692	ENSACLP00000032839	Uncharacterized protein.	Uncharacterized protein.	0.864
ENSACLP00000010692	hgfac	ENSACLP00000010692	ENSACLP00000005830	Uncharacterized protein.	HGF activator.	0.864