Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC113029159FAST kinase domains 3. (659 aa)    
Predicted Functional Partners:
fastkd1
FAST kinase domains 1.
    
 
 0.911
stk16
Serine/threonine kinase 16.
    
   0.811
fastkd2
FAST kinase domains 2.
   
 
 0.780
etfa
Electron transfer flavoprotein subunit alpha.
  
 0.760
ENSACLP00000021211
Mitochondrial ribosomal protein S31.
    
 
 0.747
etfb
Electron transfer flavoprotein subunit beta.
   
 0.744
mtrr
5-methyltetrahydrofolate-homocysteine methyltransferase reductase.
  
  
 0.729
mrps22
Mitochondrial ribosomal protein S22.
   
 
 0.712
dhx30
DEAH (Asp-Glu-Ala-His) box helicase 30.
    
 
 0.682
LOC113024466
Pentatricopeptide repeat domain 1.
    
 
 0.680
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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