STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003085Solute carrier family 30 member 6. (508 aa)    
Predicted Functional Partners:
slc30a5
Solute carrier family 30 member 5.
   
 
0.899
ENSACLP00000025245
Uncharacterized protein.
  
 0.664
slc39a13
Solute carrier family 39 member 13.
   
 0.659
SLC39A11
Solute carrier family 39 member 11.
   
 0.654
LOC113037520
Solute carrier family 30 member 2.
    
 
 0.633
slc30a9
Solute carrier family 30 member 9.
  
 
 0.628
LOC113011700
Solute carrier family 39 member 8.
  
 0.623
ndufs2
NADH:ubiquinone oxidoreductase core subunit S2; Belongs to the complex I 49 kDa subunit family.
     
 0.577
slc30a4
Solute carrier family 30 member 4.
    
 
 0.576
SLC39A12
Solute carrier family 39 member 12.
  
 0.557
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.