STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP0000000308640S ribosomal protein S27. (91 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
rps28
Ribosomal protein S28.
   
 0.994
rps26
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.994
rps10
Ribosomal protein S10.
   
 0.993
ENSACLP00000001280
Ribosomal protein S29.
   
 0.993
rps25
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.993
ENSACLP00000006383
Si:dkey-159f12.2.
   
 0.993
ENSACLP00000009119
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.993
ENSACLP00000011733
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.993
ENSACLP00000012734
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 0.993
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.