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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
usp10Ubiquitin carboxyl-terminal hydrolase. (879 aa)    
Predicted Functional Partners:
g3bp1
GTPase activating protein (SH3 domain) binding protein 1.
   
 
 0.963
ENSACLP00000033932
Zgc:56304.
   
 
 0.963
LOC113018712
Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family.
    
 0.921
ENSACLP00000019390
Uncharacterized protein.
    
 0.885
ENSACLP00000004556
tRNA selenocysteine 1 associated protein 1b.
    
 
 0.860
trnau1ap
tRNA selenocysteine 1 associated protein 1a.
    
 
 0.860
ENSACLP00000009605
Ubiquitin B.
    
 0.845
LOC113030103
Uncharacterized protein.
    
 0.845
usp13
Ubiquitinyl hydrolase 1.
     
 0.811
usp5
Ubiquitin carboxyl-terminal hydrolase.
     
 0.811
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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