Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113020404Uncharacterized protein. (851 aa)    
Predicted Functional Partners:
lgi3
Leucine-rich repeat LGI family, member 3.
     
 0.781
adam23
ADAM metallopeptidase domain 23.
   
 0.738
SENP6
SUMO specific peptidase 6.
    
   0.719
lgi2
Leucine-rich repeat LGI family, member 2a.
     
 0.709
LOC113024239
Leucine-rich repeat LGI family, member 2b.
     
 0.709
LOC113034674
Leucine-rich, glioma inactivated 1a.
     
 0.624
lgi1
Leucine-rich, glioma inactivated 1b.
     
 0.624
adam17
ADAM metallopeptidase domain 17b.
     
 0.597
LOC113030203
Discs, large homolog 4a (Drosophila); Belongs to the MAGUK family.
    
 0.573
ENSACLP00000027470
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.573
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.