STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113020404Uncharacterized protein. (851 aa)    
Predicted Functional Partners:
lgi2
Leucine-rich repeat LGI family, member 2a.
     
 0.675
LOC113024239
Leucine-rich repeat LGI family, member 2b.
     
 0.675
lgi3
Leucine-rich repeat LGI family, member 3.
     
 0.643
adam23
ADAM metallopeptidase domain 23.
    
0.612
LOC113030203
Discs, large homolog 4a (Drosophila); Belongs to the MAGUK family.
    
 0.596
ENSACLP00000027470
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.596
ENSACLP00000028183
Discs, large homolog 3 (Drosophila); Belongs to the MAGUK family.
    
 0.596
ENSACLP00000028400
Si:dkey-31j3.11.
    
 0.596
LOC113010204
Discs, large (Drosophila) homolog 1, like; Belongs to the MAGUK family.
    
 0.596
ENSACLP00000036643
Discs, large homolog 2 (Drosophila).
    
 0.596
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.