Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
tmem86aTransmembrane protein 86A. (237 aa)    
Predicted Functional Partners:
gdpd1
Glycerophosphodiester phosphodiesterase domain containing 1.
     
 0.884
LOC113021016
Glycerophosphodiester phosphodiesterase domain containing 3a.
     
 0.884
LOC113020995
Transmembrane protein 86B.
     
 0.877
LOC113033835
Phospholipase A(2).
     
  0.872
enpp2
Ectonucleotide pyrophosphatase/phosphodiesterase 2.
     
  0.872
LOC113021353
PLA2c domain-containing protein.
     
  0.872
ENSACLP00000007478
Protein interacting with cyclin A1.
     
  0.872
LOC113019998
Phospholipase A(2).
     
  0.872
enpp6
Ectonucleotide pyrophosphatase/phosphodiesterase 6.
     
  0.872
ENSACLP00000010045
Si:dkey-177p2.18.
     
  0.872
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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