STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113021286Nuclear factor, interleukin 3 regulated, member 6. (407 aa)    
Predicted Functional Partners:
nr1d1
Nuclear receptor subfamily 1, group d, member 1.
   
 0.941
rorb
RAR-related orphan receptor B.
    
 0.927
ENSACLP00000009920
Nuclear receptor subfamily 1, group D, member 4a.
   
 0.878
LOC113031463
Nuclear receptor subfamily 1, group D, member 2a.
   
 0.878
LOC113014232
Nuclear receptor subfamily 1, group D, member 2b.
   
 0.878
LOC113022594
Nuclear receptor subfamily 1, group D, member 4b.
   
 0.875
ENSACLP00000007236
Uncharacterized protein.
    
 0.872
rora
RAR-related orphan receptor A, paralog a.
    
 0.872
stk40
Serine/threonine kinase 40.
    
   0.853
ENSACLP00000008064
Uncharacterized protein.
   
 0.840
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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