STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srpk1SRSF protein kinase 1a. (667 aa)    
Predicted Functional Partners:
SRSF4
Serine and arginine rich splicing factor 4.
    
 0.944
LOC113006918
Serine and arginine rich splicing factor 5b.
    
 0.944
srsf5
Serine and arginine rich splicing factor 5a.
    
 0.944
ENSACLP00000031379
Uncharacterized protein.
    
 0.936
ENSACLP00000035990
RRM domain-containing protein.
    
 0.936
ENSACLP00000023120
Serine and arginine rich splicing factor 9.
    
 0.928
LOC113036335
Uncharacterized protein.
    
 0.918
LOC113030324
Uncharacterized protein.
    
 0.918
LOC113020183
RRM domain-containing protein.
    
 0.895
LOC113028211
Serine and arginine rich splicing factor 2a.
    
 0.895
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.