Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003117Fork-head domain-containing protein. (334 aa)    
Predicted Functional Partners:
LOC113036815
Fork-head domain-containing protein.
     
  0.871
LOC113013070
MBD domain-containing protein.
    
 0.768
suox
Sulfite oxidase.
     
  0.765
ENSACLP00000000401
Forkhead box N4.
   
    0.746
trps1
Trichorhinophalangeal syndrome I.
    
 0.699
sirt1
Deacetylase sirtuin-type domain-containing protein.
    
 0.695
dlx1
Distal-less homeobox 1a.
   
 
 0.679
FOXJ3
Forkhead box J3.
     
  0.676
LOC113013014
Fork-head domain-containing protein.
     
  0.676
dlx2
Distal-less homeobox 2b.
   
 
 0.672
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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