STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003119Uncharacterized protein. (572 aa)    
Predicted Functional Partners:
ENSACLP00000018204
Protein tyrosine phosphatase receptor type C.
   
 0.648
ENSACLP00000019486
Protein tyrosine phosphatase non-receptor type 11b.
   
  0.600
ptpn6
Protein tyrosine phosphatase non-receptor type 6.
   
  0.600
ptpn11
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
  0.600
ENSACLP00000005906
Relaxin family peptide receptor 2a.
    
  0.541
lgr5
G_PROTEIN_RECEP_F1_2 domain-containing protein.
    
  0.541
ENSACLP00000017254
Relaxin family peptide receptor 1.
    
  0.541
lgr4
Leucine-rich repeat containing G protein-coupled receptor 4.
    
  0.541
LOC113030556
Uncharacterized protein.
  
 
  0.453
LOC113030681
LRRNT domain-containing protein.
   
 0.448
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.