STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sav1Salvador family WW domain containing protein 1. (414 aa)    
Predicted Functional Partners:
lats1
Large tumor suppressor kinase 1.
    
 0.997
stk3
Serine/threonine kinase 3 (STE20 homolog, yeast).
    
 0.993
LOC113021863
Uncharacterized protein.
    
 0.993
lats2
Large tumor suppressor kinase 2.
    
 0.993
LOC113025846
WT1 interacting protein.
   
 0.973
LOC113030571
Angiomotin.
    
 0.972
LIMD1
LIM domains containing 1.
   
 0.971
LOC113030350
Neurofibromin 2b (merlin).
    
 0.961
nf2
Neurofibromin 2a (merlin).
    
 0.955
LOC113033301
MOB kinase activator 1A.
    
 0.949
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.