Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmem218Transmembrane protein 218. (115 aa)    
Predicted Functional Partners:
abhd14b
Abhydrolase domain containing 14B.
      
 0.724
ENSACLP00000035807
MOB kinase activator 3C.
      
 0.715
mfrp
Membrane frizzled-related protein.
      
 0.704
ENSACLP00000002812
Cyclin-dependent kinase-like 1 (CDC2-related kinase); Belongs to the protein kinase superfamily.
      
 0.658
ogfod2
2-oxoglutarate and iron-dependent oxygenase domain containing 2.
      
 0.655
ENSACLP00000011309
Transmembrane protein 67.
      
 0.655
tmem231
Transmembrane protein 231.
      
 0.654
LOC113032048
Transmembrane protein 216.
      
 0.652
tmem17
Transmembrane protein 17.
   
  
 0.648
LOC113034365
Zgc:112294.
   
  
 0.648
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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