STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003166Ig-like domain-containing protein. (283 aa)    
Predicted Functional Partners:
ENSACLP00000018204
Protein tyrosine phosphatase receptor type C.
    
 0.663
ENSACLP00000019486
Protein tyrosine phosphatase non-receptor type 11b.
    
  0.564
ptpn6
Protein tyrosine phosphatase non-receptor type 6.
    
  0.564
ptpn11
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
    
  0.564
ENSACLP00000001541
Ig-like domain-containing protein.
     
  0.472
ENSACLP00000013948
Uncharacterized protein.
  
     0.447
pla2g4a
Phospholipase A2.
     
  0.444
LOC113010089
Vav 3 guanine nucleotide exchange factor b.
    
  0.426
ntng1
Netrin g1a.
    
  0.426
ENSACLP00000002145
Ig-like domain-containing protein.
     
  0.410
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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