STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000003169HAUS augmin-like complex, subunit 1. (277 aa)    
Predicted Functional Partners:
ENSACLP00000018554
HAUS augmin-like complex, subunit 3.
   
 0.995
haus8
Uncharacterized protein.
    
 0.987
haus7
Uncharacterized protein.
   
 0.984
rbm42
RNA binding motif protein 42.
   
 0.980
haus6
HAUS6_N domain-containing protein.
    
 0.974
haus4
HAUS augmin-like complex, subunit 4.
   
 0.965
haus2
HAUS augmin like complex subunit 2.
    
 0.955
LOC113018755
Uncharacterized protein.
   
 0.886
ajuba
Ajuba LIM protein.
   
 0.886
LIMD1
LIM domains containing 1.
   
 0.886
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.