STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eva1cEva-1 homolog C (C. elegans). (423 aa)    
Predicted Functional Partners:
pofut2
Protein O-fucosyltransferase 2.
      
 0.493
LOC113030565
Slit homolog 3 (Drosophila).
    
 
 0.421
slit1
Slit homolog 1a (Drosophila).
    
 
 0.421
LOC113024679
Slit homolog 1b (Drosophila).
    
 
 0.421
nyx
Nyctalopin.
    
 
 0.421
ENSACLP00000024091
Slit homolog 2 (Drosophila).
    
 
 0.421
urb1
URB1 ribosome biogenesis homolog.
      
 0.412
unc5a
Unc-5 netrin receptor A.
   
 
 0.400
LOC113033469
Unc-5 netrin receptor Db.
   
 
 0.400
LOC113025731
Unc-5 netrin receptor C.
   
 
 0.400
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.