Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ecrg4ECRG4 augurin precursor b. (143 aa)    
Predicted Functional Partners:
ENSACLP00000005727
NAD(P)-bd_dom domain-containing protein.
      
 0.629
LOC113006715
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.597
vwc2l
Von Willebrand factor C domain containing 2 like.
      
 0.521
ENSACLP00000034877
Opsin 8, group member c.
      
 0.505
uxs1
UDP-glucuronate decarboxylase 1.
      
 0.500
c1h15orf48
Zgc:153317.
      
 0.426
LOC113011405
Secretogranin II (chromogranin C), b.
      
 0.425
c7h11orf58
Zgc:56106.
      
 0.422
spx
Spexin hormone.
      
 0.419
rln3
Relaxin 3b.
      
 0.417
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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