Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113021648Uncharacterized protein. (108 aa)    
Predicted Functional Partners:
GUCY2C
Guanylate cyclase.
   
 0.993
LOC113027606
Guanylate cyclase.
   
 0.993
LOC113030358
Transmembrane and immunoglobulin domain containing 1.
   
  
 0.945
LOC113021753
Uncharacterized protein.
  
  
  0.899
npr3
PDZ domain-containing protein.
    
 0.830
SUSD5
Sushi domain containing 5.
      
 0.700
tmem108
Transmembrane protein 108.
      
 0.694
ENSACLP00000000506
LEM domain-containing protein.
      
 0.664
ENSACLP00000019390
Uncharacterized protein.
      
 0.639
ENSACLP00000020243
Protein kinase domain-containing protein.
    
 0.630
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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